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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919220.1_cds_XP_016468465.1_61098
CDS Infomation

[gene=LOC107791001] [db_xref=GeneID:107791001] [protein=probable E3 ubiquitin-protein ligase LOG2] [protein_id=XP_016468465.1] [location=complement(join(62876..62992,63630..64128,66364..66845))] [gbkey=CDS]
Sequence

ATGGGTAATATGGGAAGCAGTGGTGTGAACGGCCGGCGACGGAGCAGTAGCCGGAGGAGC
CATCCACCACCGCCTCCACCACCACAACCTCCGCAGCCGGAGATAAGCGCGAACCGGTAC
GTATTCGCGGCGGCCACACCTTATCCTGCTCAATACCCAAACCCTAATGCTCCGCCGTAT
TATCAATACCCGGGTTACTATCCGCCGCCCCCGCCGGCGATGCCCGTGCCGTTACCGGCT
CCTTATGATCATCATCATAGGATGGACAACCACCCGGGTCATGCTAATTGGGTTAACGGG
CCGGGGCGGTACCCGTGTGGGCCGATGATGCCTCCGCCTGCACCATATGTGGAGCATCAA
AAAGCTGTGACAATAAGAAATGATGTTAATTTGAAGAAGGAGACTTTAAGGATTGAGCCT
GATGAAGATAACCCTGGCAAATACCTTGTGGCTTTCACTTTTGATGCCACTGTTCCTGGG
AGCATGACTGTCATTTTCTTTGCAAAAGAAGGTGAAGATTGTTGCTTGACTCCTATGAAG
GAAAGCTTGCTTCCACCAGTAACTTTTGAGTTTCAAAAAGGTTTAGCTCAGAAGTTTAGG
CAACCTTCCGGAACTGGCATTGATCTTTCAATGTTTGAAGAAGTAGAATTGTCCAAAGAT
GGTGAGGCGGATGTGTATCCACTTGCTGTTAAGGCGGAGGCATCACCAGATAGCCACAGT
GGATCAGAGGATGGGAGTGCAGCGGCAGGGTCCACTAATTCACAGATTACTCAAGCAATT
TTCGAAAAGGACAAAGGTGAGTACCATGTTAGGGTGGTGAAGCAAATCCTCTGGGTCAAT
GGCATGAGGTATGAATTGCAAGAGATATATGGGATTGGTAATTCAGTTGAAAGCGACTTT
GATGGAAATGATCCCGGGAAAGAATGTGTGATATGCCTCTCTGAACCTCGGGACACTACT
GTACTTCCATGTCGGCACATGTGTATGTGCAGCGGATGTGCAAAGGTTTTGAGGTTCCAG
ACAAATCGCTGTCCTATTTGTCGGCAGCCAGTTGAGCGCCTCTTGGAGATCAAGGTTAGC
GAAGGTGCTGAAGAGTAA

Peptide Sequence

PEP ID

XP_016468465.1
PEP Infomation

PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Nicotiana tabacum]
Sequence

MGNMGSSGVNGRRRSSSRRSHPPPPPPPQPPQPEISANRYVFAAATPYPAQYPNPNAPPY
YQYPGYYPPPPPAMPVPLPAPYDHHHRMDNHPGHANWVNGPGRYPCGPMMPPPAPYVEHQ
KAVTIRNDVNLKKETLRIEPDEDNPGKYLVAFTFDATVPGSMTVIFFAKEGEDCCLTPMK
ESLLPPVTFEFQKGLAQKFRQPSGTGIDLSMFEEVELSKDGEADVYPLAVKAEASPDSHS
GSEDGSAAAGSTNSQITQAIFEKDKGEYHVRVVKQILWVNGMRYELQEIYGIGNSVESDF
DGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVS
EGAEE

Transcript Sequence

Gene sequence data has not been registered.